Research done with Epina ImageLab

The following research papers used Epina ImageLab for the analysis and interpretation of image data (in chronological order):(1)
 
Authors Title & Reference

B.N. Vinay Kumar, L.A. Löschel, H.K. Imhof, M.G.J. Löder, C. Laforsch Analysis of microplastics of a broad size range in commercially important mussels by combining FTIR and Raman spectroscopy approaches
Environmental Pollution, 24 Nov 2020, https://doi.org/10.1016/j.envpol.2020.116147
L. Shi, X. Liu, L. Shi, H.T. Stinson, J. Rowlette, L.J. Kahl, C.R. Evans, C. Zheng, L.E.P. Dietrich, W. Min Mid-infrared metabolic imaging with vibrational probes.
Nature Methods 17, 844–851 (2020). https://doi.org/10.1038/s41592-020-0883-z
B.P. Mateu, P. Bock, N. Gierlinger Raman Imaging of Plant Cell Walls.
In: Popper Z. (eds) The Plant Cell Wall. Methods in Molecular Biology, vol 2149. Humana 2020, New York, NY. https://doi.org/10.1007/978-1-0716-0621-6_15
S. Smetaczek, M. Bonta, A. Wachter-Welzl, S. Taibl, R. Wagner, D. Rettenwander, J. Fleig, A. Limbeck Spatially resolved stoichiometry determination of Li7La3Zr2O12 solid-state electrolytes using LA-ICP-OES
J. Anal. At. Spectrom. 35 (2020) 972-983 Download PDF
C. Herzig, J. Frank, A.K. Opitz, J. Fleig, A. Limbeck Quantitative imaging of structured complex metal oxide thin films using online-LASIL-ICP-MS
Talanta, 217 (2020) 121012
A. Röhsler, O. Sobol, H. Hänninen, T Böllinghaus In-situ ToF-SIMS analyses of deuterium re-distribution in austenitic steel AISI 304L under mechanical load
Scientific Reports 10 (2020) 3611 Download PDF
P. Vítek, C. Ascaso, O. Artieda, M.C. Casero, J. Wierzchos Raman imaging of microbial colonization in rock—some analytical aspects
Analytical and Bioanalytical Chemistry 412 (2020) 3717–3726
M. González-Cabrera, P. Arjonilla, A. Domínguez-Vidal, M.J.Ayora-Cañada Natural or synthetic? Simultaneous Raman/luminescence hyperspectral microimaging for the fast distinction of ultramarine pigments
Dyes and Pigments, Volume 178 (2020) 108349
N. Xiao, P. Bock, S.J. Antreich, Y.M. Staedler, J. Schönenberger, N. Gierlinger From the Soft to the Hard: Changes in Microchemistry During Cell Wall Maturation of Walnut Shells
Front. Plant Sci., 21 April 2020 | https://doi.org/10.3389/fpls.2020.00466
L. Pagnin, L. Brunnbauer. R. Wiesinger., A. Limbeck, M. Schreiner Multivariate analysis and laser-induced breakdown spectroscopy (LIBS): a new approach for the spatially resolved classification of modern art materials
Analytical and Bioanalytical Chemistry 412 (2020) 3187–3198, DOI: 10.1007/s00216-020-02574-z
L. Brunnbauer, S. Larisegger, H. Lohninger, M. Nelhiebel, A. Limbeck Spatially resolved polymer classification using laser induced breakdown spectroscopy (LIBS) and multivariate statistics
Talanta 209, (2020) 120572, DOI: 10.1016/j.talanta.2019.120572 Download PDF
B. Hufnagl, H. Lohninger A graph-based clustering method with special focus on hyperspectral imaging
Analytica Chimica Acta, 2019, DOI:10.1016/j.aca.2019.10.071
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S. Frei, S. Piehl, B.S. Gilfedder, M.G.J. Löder, J. Krutzke, L. Wilhelm, C. Laforsch Occurence of microplastics in the hyporheic zone of rivers
Scientific Reports, 2019, 9:15256 DOI:10.1038/s41598-019-51741-5
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D. Wu, C. Haude, R. Burger, O. Peters Application of terahertz time domain spectroscopy for NDT of oxide-oxide ceramic matrix composites
Infrared Physics & Technology 102 (2019) 102995 DOI: 10.1016/j.infrared.2019.102995
A. Hajian, S. Smetaczek, C. Zellner, M. Stöger-Pollach, T. Konegger, A. Limbeck, U. Schmid Tailored and deep porosification of LTCC substrates with phosphoric acid
Journal of the European Ceramic Society 39 (2019) 10, 3112-3119 DOI 10.1016/j.jeurceramsoc.2019.04.026
B. Hufnagl, D. Steiner, E. Renner, M.G.J. Löder, Ch. Laforsch, H. Lohninger A methodology for the fast identification and monitoring of microplastics in environmental samples using random decision forest classifiers
Analytical Methods, 2019, DOI:10.1039/c9ay00252a
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A. Röhsler, O. Sobol, W.E.S. Unger, T. Böllinghaus Comprehensive study of deuterium-induced effects in austenitic stainless steel AISI 304L
International Journal of Hydrogen Energy 44 (2019) 12228-12238 DOI: 10.1016/j.ijhydene.2019.03.058
S. Smetaczek. A. Wachter-Welz, R. Wagner, D. Rettenwander, G. Amthauer, L. Andrejs, S. Taibl, A. Limbeck, J. Fleig Local Li-ion conductivity changes within Al stabilized Li7La3Zr2O12 and their relationship to three-dimensional variations of the bulk composition
J. Mater. Chem. A 7 (2019) 6818-6831, DOI: 10.1039/C9TA00356H
C. Gasser, M. Göschl, J. Ofner, B. Lendl Stand-off Hyperspectral Raman Imaging and Random Decision Forest Classification: A Potent Duo for the Fast, Remote Identification of Explosives
Anal. Chem. 91 (2019) 7712-7718
V.U. Weiss, K, Wieland, A. Schwaighofer, B. Lendl, G. Allmaier Native Nano-electrospray Differential Mobility Analyzer (nES GEMMA) Enables Size Selection of Liposomal Nanocarriers Combined with Subsequent Direct Spectroscopic Analysis
Anal. Chem. 91 (2019) 3860-3868
C. Gasser, M. González-Cabrera, M.J. Ayora-Cañada, A. Domínguez-Vidal, B. Lendl Comparing mapping and direct hyperspectral imaging in stand-off Raman spectroscopy for remote material identification
J. Raman Spectroscopy 50 (2019) 1034-1043
M. Stibi Quality Monitoring of Machine Vision Systems and Defect Detection in Polymer Products
Master Thesis, Vienna University of Technology, April 2019
E.C. Atwood, F.M. Falcieri, S. Piehl, M. Bochow, M. Matthies, J. Franke, S. Carniel, M. Sclavo, C. Laforsch, F. Siegert Coastal accumulation of microplastic particles emitted from the Po River, Northern Italy: Comparing remote sensing and hydrodynamic modelling with in situ sample collections
Marine Pollution Bulletin 138 (2019) 561-574 DOI:10.1016/j.marpolbul.2018.11.045
P. Zou, O. Peters, C. Gleichweit, R. Holzwarth, and H. Lohninger THz Hyperspectral Images Analyzed by Multivariate Statistical Methods
9th International Symposium on Ultrafast Phenomena and Terahertz Waves, OSA Technical Digest, Optical Society of America, 2018
E.C. Atwood Remote sensing data as a tool to monitor and mitigate natural catastrophesresulting from anthropogenic activities: Case studies over land and water
PhD Thesis, Ludwig-Maximilian-Universität, Munich, October 2018
M. Holzlechner, M. Bonta, H. Lohninger, A. Limbeck, M. Marchetti-Deschmann Multisensor Imaging—From Sample Preparation to Integrated Multimodal Interpretation of LA-ICPMS and MALDI MS Imaging Data.
Anal. Chem. (2018) DOI: 10.1021/acs.analchem.8b00816
W. Ganglberger Feature Generation and Selection in Hyperspectral Imaging
Master Thesis, Vienna University of Technology, May 2018
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M. Felhofer, B. Prats-Mateu, P. Bock, N. Gierlinger Antifungal stilbene impregnation: transport and distribution on the micron-level
Tree Physiology 00 (2018) 1–12; DOI:10.1093/treephys/tpy073
A. Röhsler, O. Sobol, G. Nolze, W.E.S. Unger, T. Böllinghaus Use of time-of-flight secondary ion mass spectrometry for the investigation of hydrogen-induced effects in austenitic steel AISI 304L
J. Vac. Sci. Technol B36, 03F103 (2018), DOI: 10.1116/1.5013931
M. Großgarten, M. Holzlechner, A. Vennemann, A. Balbekova, K. Wieland, M. Sperling, B. Lendl, M. Marchetti-Deschmann, U. Karst, M. Wiemann Phosphonate coating of SiO2 nanoparticles abrogates inflammatory effects and local changes of the lipid composition in the rat lung: a complementary bioimaging study
Particle and Fibre Toxicology 2018 15:31 Download PDF
O. Sobol Hydrogen assisted cracking and transport studied by ToF-SIMS and data fusion with HR-SEM.
PhD Thesis, BAM, Berlin and Otto-von-Guericke-Universität, Magdeburg, February 2018.
A. Wachter-Welzl, J. Kirowitz, R. Wagner, S. Smetaczek, G.C. Brunauer, M. Bonta, D. Rettenwander, S. Taibl, A. Limbeck, G. Amthauer, J. Fleig The origin of conductivity variations in Al-stabilized Li7La3Zr2O12 ceramics.
Solid State Ionics 319 (2018) 203–208
A. Balbekova Near- and Far-Field Mid-Infrared Spectroscopy and Spectroscopic Imaging for Biomedical Applications.
PhD Thesis, Vienna University of Technology, December 2017.
U. Kostiv,L. Rajsiglová, D. Luptáková, T. Pluhácek, L. Vannucci, V. Havlícek, H. Engstová, D. Jirák, M. Šlouf, P. Makovicky, R. Sedláceke, D. Horák Biodistribution of upconversion/magnetic silica-coated NaGdF4:Yb3+/Er3+ nanoparticles in mouse models
RSC Adv., 2017,7, 45997-46006; 10.1039/C7RA08712H
M. Bonta, S. Török, B. Döme, A. Limbeck Tandem LA–LIBS Coupled to ICP-MS for Comprehensive Analysis of Tumor Samples
Spectroscopy, Volume 32, Issue 10, pg 42–46
A. Wachter-Welzl The composition-dependent conductivity of Li7La3Zr2O12 ceramics investigated by spatially resolved impedance spectroscopy
PhD Thesis, Technische Universität Wien, Oktober 2017. Download PDF
L. Löschel Microplastic Contamination of Mussels for Human Consumption.
Master Thesis, University of Bayreuth, September 2017.
J. Ofner, F. Brenner, K. Wieland, E. Eitenberger, J. Kirschner, C. Eisenmenger-Sittner, S. Török, B. Döme, T. Konegger, A. Kasper-Giebl, H. Hutter, G. Friedbacher, B. Lendl, H. Lohninger Image-Based Chemical Structure Determination
Scientific Reports Vol. 7 (2017) 6832, DOI: 10.1038/s41598-017-07041-x
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C. Gasser, J. Ofner, B. Lendl Stand-off hyperspectral imaging – towards mobile, high throughput remote chemical identification and quantification using chemometrics
ICAVS 9 Conference, Victoria, June 2017
G. Bauer, B. Achleitner, M. Bonta, G. Friedbacher, A. Limbeck Analysis of single fly ash particles using laser ablation ICP-MS – an approach achieving lateral elemental distribution information via imaging
RSC Adv., 2017, 7, 20510-20519; DOI: 10.1039/C7RA00975E
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A. Balbekova; M. Bonta; S. Török; J. Ofner; B. Döme; A. Limbeck; B. Lendl FTIR-spectroscopic and LA-ICP-MS imaging for combined hyperspectral image analysis of tumor models.
Analytical Methods, 2017, Vol.9(37), pp.5464-5471.
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W.N. Reichelt, A. Kaineder, M. Brillmann, L. Neutsch, A. Taschauer, H. Lohninger, C. Herwig High throughput inclusion body sizing: Nano particle tracking analysis.
Biotechnol. J., 2017, 12, 1600471. doi:10.1002/biot.201600471
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A. Balbekova, H. Lohninger, G.A.F. Van Tilborg, R.M. Dijkhuizen, M. Bonta, A. Limbeck, B. Lendl, K.A. Al-Saad, M. Ali, M. Celikic, J. Ofner Fourier Transform Infrared (FT-IR) and Laser Ablation Inductively Coupled Plasma-Mass Spectrometry (LA-ICP-MS) Imaging of Cerebral Ischemia: Combined Analysis of Rat Brain Thin Cuts Toward Improved Tissue Classification.
Applied spectroscopy, 01 January 2017, pp.3702817734618
B. Bird, J. Rowlette High definition infrared chemical imaging of colorectal tissue using a Spero QCL microscope.
Analyst, Jan 2017, DOI: 10.1039/c6an01916a.
E. Wetzer Evaluating a Novel Approach for Fiber Analysis in Forensic Applications.
Master Thesis, Vienna University of Technology, January 2017.
C. Gasser, J. Ofner, B. Lendl Stand-Off Hyperspectral Raman Imaging.
IRDG 216, 19th December 2016, London
B. Bird, J. Rowlette A protocol for rapid, label-free histochemical imaging of fibrotic liver.
Analyst, Nov 2016, DOI: 10.1039/c6an02080a.
J. Ofner, J. Kirschner, E. Eitenberger, G. Friedbacher, A. Kasper-Giebl, H. Lohninger, C. Eisenmenger-Sittner, B. Lendl A novel substrate for multisensor hyperspectral imaging.
Journal of Microscopy, Nov 2016, DOI: 10.1111/jmi.12506
K.A. Kamilli, J. Ofner, T. Krause, T. Sattler, P.Schmitt-Kopplin, E. Eitenberger, G. Friedbacher, B. Lendl, H. Lohninger, H.F. Schöler, A. Held How salt lakes affect atmospheric new particle formation: A case study in Western Australia.
Science of The Total Environment 573 (2016) 985-995
O. Sobol, G. Holzlechner, G. Nolze, T. Wirth, D. Eliezer, T. Boellinghaus, W.E.S. Unger Time-of-Flight Secondary Ion Mass Spectrometry (ToF-SIMS) imaging of deuterium assisted cracking in a 2205 duplex stainless steel micro-structure.
Materials Science and Engineering: A
Volume 676, 31 October 2016, Pages 271-277 Download PDF
E. Renner Statistical Preliminaries of Using Classifiers to Detect Malignant Melanoma in Infrared Hyperspectral Images.
Master Thesis, Vienna University of Technology, October 2016.
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M. Felhofer RAMAN imaging to reveal in-situ molecular changes of wood during heartwood formation and drying.
Master Thesis, University of Natural Resources and Life Sciences, Vienna, September 2016.
T. Pluhacek, M. Petrik, D. Luptakova, O. Benada, A. Palyzova, K. Lemr, V. Havlicek Aspergillus infection monitored by multimodal imaging in a rat model.
Proteomics, 2016, Vol. 16, pp 1785–1792
B. Bird Large-area infrared chemical imaging of colorectal tissue using a Spero microscope.
Application Note 201602, DayLight Solutions Inc. Download PDF
J. Ofner, T. Deckert-Gaudig, K.A. Kamilli, A. Held, H. Lohninger, V. Deckert, B. Lendl Tip-Enhanced Raman Spectroscopy of Atmospherically Relevant Aerosol Nanoparticles
Anal. Chem., 2016, 88 (19), pp 9766–9772
N.N. (Daylight Inc.) Observing Dynamic Proton-Deuterium Exchange in Microfluidic Systems
https://www.azom.com/article.aspx?ArticleID=12578
M. Bonta, J.J. Gonzalez, C. Derrick Quarles, R.E. Russo, B. Hegedus, A. Limbeck Elemental mapping of biological samples by the combined use of LIBS and LA-ICP-MS.
Journal of Analytical Atomic Spectrometry 31, no. 1 (2016): 252-258.
M. Bonta, A. Eitzenberger, S. Burtscher, A. Limbeck Quantification of chloride in concrete samples using LA-ICP-MS.
Cement and Concrete Research 86 (2016): 78-84 Download PDF
J. Kilgus, P. Müller, P. M. Moselund, M. Brandstetter Application of supercontinuum radiation for mid-infrared spectroscopy.
In SPIE Photonics Europe, pp. 98990K-98990K. International Society for Optics and Photonics, 2016.
O. Sobol, G. Holzlechner, M. Holzweber, H. Lohninger, T. Boellinghaus, W.E.S. Unger First use of data fusion and multivariate analysis of ToF-SIMS and SEM image data for studying deuterium-assisted degradation processes in duplex steels.
Surface and Interface Analysis, 2016, DOI: 10.1002/sia.6015
M. Bonta, B. Hegedus, A. Limbeck Application of dried-droplets deposited on pre-cut filter paper disks for quantitative LA-ICP-MS imaging of biologically relevant minor and trace elements in tissue samples.
Analytica chimica acta 908 (2016): 54-62.
J. Wittmer, S. Bleicher, J. Ofner, C. Zetzsch Iron(III)-induced activation of chloride from artificial sea-salt aerosol.
Environ. Chem. 2015, 12, 461–475.
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B. Mohar Real-time mid-IR chemical imaging of dynamic processes: Proton-Deuteron exchange within a microfluidic system using the Spero(TM) QCL based microscope.
Application Note: 201501, Daylight Solutions Inc. Download PDF
M. Bonta, A. Limbeck, C. Derrick Quarles Jr, D. Oropeza, R.E. Russo, J.J. Gonzalez A metric for evaluation of the image quality of chemical maps derived from LA-ICP-MS experiments.
Journal of Analytical Atomic Spectrometry 30, no. 8 (2015): 1809-1815.
J. Ofner, K.A. Kamilli, E. Eitenberger, G. Friedbacher, B. Lendl, A. Held, H. Lohninger Chemometric analysis of multisensor hyperspectral images of precipitated atmospheric particulate matter.
Anal. Chem. 87 (2015), 9413-9420
J. Ofner, M. Kistler, J Matzl, E. Cetintas, E. Schreiner, G. Schauer, R. Hitzenberger, E. Eitenberger, G. Friedbacher,
B. Lendl, J. Lohninger, A. Kasper-Giebl
Comparison of bulk and image-based analysis of aerosol particles, collected at the Sonnblick Observatory in Austria: First attempts towards image based quantification
European Aerosol Conference 2015, Milano; 06.09.2015 - 11.09.2015
K.A. Kamilli Organic particle formation in halogen-influenced environments
PhD Thesis, University of Bayreuth, 2015
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F. Cappa, V. Pintus, J. Ofner, M. Schreiner, B. Lendl Raman Imaging for Cultural Heritage Investigations.
ICAVS 8 Conference, Vienna, July 2015
H. Pühringer, H. Lohninger, M. Pfleger and S. Katletz Monitoring the Dehydration Level of Organic Layers with Terahertz Hyperspectral Imaging.
OTST - Optical Terahertz Science & Technology Conference, San Diego, 2015
H. Pühringer, H. Lohninger, M. Pfleger and S. Katletz Terahertz hyperspectral imaging: from self-made pellets to real life samples and the application of chemometric methods
OTST - Optical Terahertz Science & Technology Conference, San Diego, 2015
H. Lohninger, J. Ofner Multisensor hyperspectral imaging as a versatile tool for image-based chemical structure determination.
Spectroscopy Europe Vol. 26 No. 5 (2014), 6-10, Download PDF
J. Ofner, K. Kamilli, A. Held, E. Eitenberger, G. Friedbacher, J. Lohninger, B. Lendl Raman and electron microscopy of aerosol particles released above Australian salt lakes.
EGU General Assembly 2014, held 27 April - 2 May, 2014 in Vienna, Austria, id.14603
W. Nischkauer, F. Vanhaecke, S. Bernacchi, C. Herwig, A. Limbeck Radial line-scans as representative sampling strategy in dried-droplet laser ablation of liquid samples deposited on pre-cut filter paper disks.
Spectrochimica Acta Part B 101 (2014) 123-129
M. Bonta, H. Lohninger, M. Marchetti-Deschmann and A. Limbeck Application of gold thin-films for internal standardization in LA-ICP-MS imaging experiments.
Analyst 139 (2014) 1521
K. Wieland, C. Koch, M. El-Zahry, J. Ofner, H. Grothe, H. Lohninger, C. Herwig, B. Lendl Hyperspectral imaging of hyphae and spores of P. chrysogenum using confocal Raman spectroscopy and SERS
XXIV. International Conference on Raman Spectroscopie (ICORS 2014), Vienna, 2014
J. Ofner, K.A. Kamilli, E. Eitenberger, H. Lohninger, G. Friedbacher, B. Lendl, A. Held Hyperspectral Raman and SEM-EDX imaging of size-segregated aerosols, released above Australian salt lakes
XXIV. International Conference on Raman Spectroscopie (ICORS 2014), Vienna, 2014
M. Bonta, J. Lohninger, V. Laszlo, B. Hegedus, A. Limbeck Quantitative LA-ICP-MS imaging of platinum in chemotherapy treated human malignant pleural mesothelioma samples using printed patterns as standard
Journal of Analytical Atomic Spectrometry, 29 (2014), 11; S. 2159 - 2167.
H. Pühringer, H. Lohninger, R. Holzer, S. Katletz, M. Pfleger, E. Schuhfried, K. Wiesauer Terahertz Hyper Spectral Imaging and multivariate data analysis deploying ImageLab.
3rd European Conference on Process Analytics and Control Technology, Barcelona, Spain, 2014
J. Ofner, K.A. Kamilli, T. Deckert-Gaudig, H. Lohninger, A. Held, B. Bernhard, V. Deckert Tip-enhanced Raman spectroscopy of nucleation-mode aerosol: New frontiers in chemical imaging of aerosol nano-particles
XXIV. International Conference on Raman Spectroscopie (ICORS 2014), Vienna, 2014
M. Bonta*, H. Lohninger and A. Limbeck Internal Standards for LA-ICP-MS Imaging Experiments on Biological Samples.
Euroanalysis 17, Warsaw, Poland, 2013
W. Nischkauer*, F. Vanhaecke, J. Lohninger and A. Limbeck Analysis of liquid foodstuffs and beverages by means of Dried-Droplet Laser Ablation ICP-OES.
European Winter Conference on Plasma Spectrochemistry. Krakow, Poland, 2013



(1) If you used Epina ImageLab for your research and want your paper to appear on this list
please send a PDF of your work to office@epina.at.